Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891764.1_cds_XP_016446607.1_41447
CDS Infomation

[gene=LOC107771691] [db_xref=GeneID:107771691] [protein=fimbrin-5-like] [protein_id=XP_016446607.1] [location=join(79260..79346,79472..79642,80151..80395,80505..80676,80784..80822,80914..80982,81261..81377,81490..81701,82704..82859,82937..83136,84280..84437,84516..84612,84804..84895,85602..85757)] [gbkey=CDS]
Sequence

ATGTCTGGTTTTGTTGGTGTTGTTGTTTCTGATCAATGGCTTCAGAGCCAATTCACCCAA
GTCGAGCTTCGTGGCCTCCATTCCAAATATGTTTCTGCGAGGAATGAATCTGGAAAGGTC
ACACTGGGAGATCTGCCGCACGTTATGTGCAAACTTAAGGCCTTCAAAGATATTCTTACT
GAGGATGACATTAGCCACATATTAAGCGAGTCATCTTCTGATATGACTGAAGAAATCGAT
TTTGAATCCTTTCTTCGGGCGTATCTAGATTTACAAGGACGAGCTACTGCTAAATTGGGT
AATACAAAATTAAAAACGTCGTCCTCATTCCTCAAGGCCAGAACCACCACAATTCGTCAC
AACATTAGTGAATCTGAAAAGACTTCATATGTTGCCCACATCAATAGCTTTCTCAGAGAT
GACAAGTTTTTGAAGGATTATCTTCCTATTGATCCATCTACCAATGCACTCTTTGATCTG
GCGAAAGATGGTGTTCTTCTATGTAAGCTTATCAATGTTGCTGTCCCTGGTACTATAGAT
GAGCGCGCTATTAATACCAAAAAGGTTCTTAATCCGTGGGAGAGGAATGAGAACCACACT
CTTTGCCTCAATTCCGCCAAGGCAATCGGTTGCACAGTGGTCAATATTGGCACCCAGGAT
TTAGTTGAAGCAAGACCTCATCTGGTTGTTGGGCTGATTTCTCAAATTATCAAGATACAA
CTATTAGCTGATCTCAATTTGAAGAAAACTCCGCAACTTGTGGAATTGGTGGAGGACAGC
AAGGATGTGGAGGAGCTCTTGGGTTTGCCTCCAGAAAAGGTTTTACTGAAATGGATGAAC
TTCCATCTAAAGAAAGCAGGCTATAAGAAGCAAGTCAATAATTTTTCATCTGATTTAAAG
GACGGAGAGGCCTATGCTCATTTGTTGAATGTTCTTGCACCTGAACATGGTACAACCACC
ACACTAGATGCTAAAGATCCAACTGAAAGAGCAAATTTGATTCTTGAGCAAGCAGAGAAA
ATGGATTGCAAAAGATATGTTACTCCACAAGACATTGTAGAGGGATCCACAAACTTAAAT
CTTGCATTTGTTGCACAAATATTCCAACACAGGAATGGATTGTCAGTGGACACGAAGAAA
ATATCTTTTGCTGAGATGATGGAAGATGATGCTCAAACATCTCGAGAAGAAAGATGCTTC
CGGTTGTGGATGAATAGCCTTGGAATTGATACTTACATAAACAATCTATTTGAGGATGTG
CGAGCAGGGTGGGTGCTACTGGAGGTACTCGACAAGATTTCGCCAGGATCAGTCAACTGG
AAGCAAGCAACAAAACCCCCTATTAAGATGCCTTTTAGGAAAGTTGAGAATTGCAACCAA
GTCATAAGGATTGGAAAAGAACTGAATTTCTCCCTTGTCAATGTAGCTGGAAATGATATT
GTACAAGGAAACAAAAAGCTCATATTAGCCTTTTTGTGGCAGCTAATGAGGTTTACAATG
CTGCAACTGTTGAAGAACTTGAGGTTTCATGCCCAAGGAAAGGAGATAACAGATGCTGAC
ATCTTAAATTGGGCAAACAGTAAAGTGAAGAGTGCAGGCAGAAAATCACAAATGGAAAGC
TTCAAGGACAAAAGTCTATCAAATGGGATGTTCTTCCTAGAACTTCTTAGTGCAGTGGAG
CCAAGGGTCGTGAATTGGAGCGTTGTAACTAAGGGAGAAACAGACGAAGATAAGAAGCTT
AATGCAACTTATATAATCAGTGTTGCGCGGAAACTTGGATGCTCCATCTTTTTATTGCCA
GAGGATATAATTGAGGTAAACCAGAAGATGATCCTTACTCTCACAGCAAGCATCATGTTT
TGGAGCTTGCAACACAAAGGTGGAACGCCAGAGACCATCCTTGAAGAAGACAGTGCTGCT
TCCGATGAATCTCCAGCAGCAGCCGCTGATGGTGAGAATGCTTCTTCCTAA

Peptide Sequence

PEP ID

XP_016446607.1
PEP Infomation

PREDICTED: fimbrin-5-like [Nicotiana tabacum]
Sequence

MSGFVGVVVSDQWLQSQFTQVELRGLHSKYVSARNESGKVTLGDLPHVMCKLKAFKDILT
EDDISHILSESSSDMTEEIDFESFLRAYLDLQGRATAKLGNTKLKTSSSFLKARTTTIRH
NISESEKTSYVAHINSFLRDDKFLKDYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTID
ERAINTKKVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEARPHLVVGLISQIIKIQ
LLADLNLKKTPQLVELVEDSKDVEELLGLPPEKVLLKWMNFHLKKAGYKKQVNNFSSDLK
DGEAYAHLLNVLAPEHGTTTTLDAKDPTERANLILEQAEKMDCKRYVTPQDIVEGSTNLN
LAFVAQIFQHRNGLSVDTKKISFAEMMEDDAQTSREERCFRLWMNSLGIDTYINNLFEDV
RAGWVLLEVLDKISPGSVNWKQATKPPIKMPFRKVENCNQVIRIGKELNFSLVNVAGNDI
VQGNKKLILAFLWQLMRFTMLQLLKNLRFHAQGKEITDADILNWANSKVKSAGRKSQMES
FKDKSLSNGMFFLELLSAVEPRVVNWSVVTKGETDEDKKLNATYIISVARKLGCSIFLLP
EDIIEVNQKMILTLTASIMFWSLQHKGGTPETILEEDSAASDESPAAAADGENASS

Transcript Sequence

Gene sequence data has not been registered.